analyze_foldamers
analyze_foldamers
is a Python package for structural analysis of coarse-grained
oligomer molecular simulations.
Identify native structures using RMSD or torsion-based clustering of trajectories
Generate histograms of all bonded parameters (bonds, angles, torsions)
Generate 2D histograms of any combination of bonded observables
Determine helical parameters for folded oligomer structures
Tools for automated rendering of molecular snapshots with VMD